estimate_ibf_arguments Struct Reference

arguments used for estimate, ibf, ibfmin More...

#include </build/reproducible-path/seqan-needle-1.0.3+ds/include/shared.hpp>

Inheritance diagram for estimate_ibf_arguments:

Public Member Functions
template<class Archive >
void	save (Archive &archive) const
template<class Archive >
void	load (Archive &archive)

Public Attributes
bool	compressed = false
std::vector< uint16_t >	expression_thresholds {}
uint8_t	number_expression_thresholds {}
bool	samplewise {false}
Public Attributes inherited from min_arguments
uint8_t	k {20}
seqan3::seed	s {0x8F'3F'73'B5'CF'1C'9A'DEULL}
seqan3::shape	shape = seqan3::ungapped{k}
seqan3::window_size	w_size {60}
Public Attributes inherited from all_arguments
std::filesystem::path	path_out {"./"}
uint8_t	threads {1}

Detailed Description

arguments used for estimate, ibf, ibfmin

Member Function Documentation

load()

template<class Archive >

void estimate_ibf_arguments::load ( Archive &  archive )

inline

save()

template<class Archive >

void estimate_ibf_arguments::save ( Archive &  archive ) const

inline

Member Data Documentation

compressed

bool estimate_ibf_arguments::compressed = false

expression_thresholds

std::vector<uint16_t> estimate_ibf_arguments::expression_thresholds {}

number_expression_thresholds

uint8_t estimate_ibf_arguments::number_expression_thresholds {}

samplewise

bool estimate_ibf_arguments::samplewise {false}

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The documentation for this struct was generated from the following file:

• /build/reproducible-path/seqan-needle-1.0.3+ds/include/shared.hpp